HL_6GZ3_114
3D structure
- PDB id
- 6GZ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUCAUAAGC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZ3_114 not in the Motif Atlas
- Homologous match to HL_4V88_220
- Geometric discrepancy: 0.4007
- The information below is about HL_4V88_220
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01927.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6GZ3|1|B1|G|1658
6GZ3|1|B1|U|1659
6GZ3|1|B1|C|1660
6GZ3|1|B1|A|1661
6GZ3|1|B1|U|1662
6GZ3|1|B1|A|1663
6GZ3|1|B1|A|1664
6GZ3|1|B1|G|1665
6GZ3|1|B1|C|1666
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BQ
- ribosomal protein uS9
- Chain BS
- ribosomal protein uS13
- Chain BT
- ribosomal protein eS19
- Chain BU
- ribosomal protein uS10
- Chain Bd
- ribosomal protein uS14
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