HL_6GZ3_122

3D structure

PDB id

6GZ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCUUCUGAUCGAG

Length

13 nucleotides

Bulged bases

6GZ3|1|A2|U|206

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ3|1|A2|C|198
6GZ3|1|A2|C|199
6GZ3|1|A2|U|200
6GZ3|1|A2|U|201
6GZ3|1|A2|C|202
6GZ3|1|A2|U|203
6GZ3|1|A2|G|204
6GZ3|1|A2|A|205
6GZ3|1|A2|U|206
6GZ3|1|A2|C|207
6GZ3|1|A2|G|208
6GZ3|1|A2|A|209
6GZ3|1|A2|G|210

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AC

ribosomal protein uL4

Chain AY

Ribosomal protein L26

Chain Ae

ribosomal protein eL32