HL_6GZ5_125

3D structure

PDB id

6GZ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUCUAUUUUGUUGGUUUUCGGAA

Length

23 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZ5|1|B1|U|882
6GZ5|1|B1|U|883
6GZ5|1|B1|C|884
6GZ5|1|B1|U|885
6GZ5|1|B1|A|886
6GZ5|1|B1|U|887
6GZ5|1|B1|U|888
6GZ5|1|B1|U|889
6GZ5|1|B1|U|890
6GZ5|1|B1|G|891
6GZ5|1|B1|U|892
6GZ5|1|B1|U|893
6GZ5|1|B1|G|894
6GZ5|1|B1|G|895
6GZ5|1|B1|U|896
6GZ5|1|B1|U|897
6GZ5|1|B1|U|898
6GZ5|1|B1|U|899
6GZ5|1|B1|C|900
6GZ5|1|B1|G|901
6GZ5|1|B1|G|902
6GZ5|1|B1|A|903
6GZ5|1|B1|A|904

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain BG

ribosomal protein eS6

Chain BI

ribosomal protein eS8

Chain BL

ribosomal protein uS17