3D structure

PDB id
6GZQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
T. thermophilus hibernating 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.28 Å

Loop

Sequence
CCUAUUGAAGCAUG
Length
14 nucleotides
Bulged bases
6GZQ|1|A1|C|599
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6GZQ|1|A1|C|589
6GZQ|1|A1|C|590
6GZQ|1|A1|U|591
6GZQ|1|A1|A|592
6GZQ|1|A1|U|593
6GZQ|1|A1|U|594
6GZQ|1|A1|G|595
6GZQ|1|A1|A|596
6GZQ|1|A1|A|597
6GZQ|1|A1|G|598
6GZQ|1|A1|C|599
6GZQ|1|A1|A|600
6GZQ|1|A1|U|601
6GZQ|1|A1|G|602

Current chains

Chain A1
23S ribosomal RNA

Nearby chains

Chain D1
50S ribosomal protein L3
Chain K1
50S ribosomal protein L15
Chain P1
50S ribosomal protein L20
Chain Q1
50S ribosomal protein L21
Chain a1
50S ribosomal protein L32

Coloring options:

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