HL_6GZQ_026

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GGGGCCCACCAGCCUAC

Length

17 nucleotides

Bulged bases

6GZQ|1|A1|A|936, 6GZQ|1|A1|A|944

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZQ|1|A1|G|929
6GZQ|1|A1|G|930
6GZQ|1|A1|G|931
6GZQ|1|A1|G|932
6GZQ|1|A1|C|933
6GZQ|1|A1|C|934
6GZQ|1|A1|C|935
6GZQ|1|A1|A|936
6GZQ|1|A1|C|937
6GZQ|1|A1|C|938
6GZQ|1|A1|A|939
6GZQ|1|A1|G|940
6GZQ|1|A1|C|941
6GZQ|1|A1|C|942
6GZQ|1|A1|U|943
6GZQ|1|A1|A|944
6GZQ|1|A1|C|945

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain M2

30S ribosomal protein S13

Chain U1

50S ribosomal protein L25