HL_6GZQ_062

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GZQ_062 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.1622

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

6GZQ|1|A1|C|2565
6GZQ|1|A1|U|2566
6GZQ|1|A1|G|2567
6GZQ|1|A1|U|2568
6GZQ|1|A1|U|2569
6GZQ|1|A1|C|2570
6GZQ|1|A1|G|2571

Current chains

Chain A1

23S ribosomal RNA

Nearby chains