HL_6GZQ_074

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GGCUUUGCC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GZQ_074 not in the Motif Atlas

Homologous match to HL_4LFB_005

Geometric discrepancy: 0.5572

The information below is about HL_4LFB_005

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

6GZQ|1|A2|G|205
6GZQ|1|A2|G|206
6GZQ|1|A2|C|207
6GZQ|1|A2|U|208
6GZQ|1|A2|U|209
6GZQ|1|A2|U|210
6GZQ|1|A2|G|211
6GZQ|1|A2|C|212
6GZQ|1|A2|C|213

Current chains

Chain A2

16S ribosomal RNA

Nearby chains