HL_6GZQ_078

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

6GZQ|1|A2|A|339

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GZQ_078 not in the Motif Atlas

Homologous match to HL_6CZR_080

Geometric discrepancy: 0.2038

The information below is about HL_6CZR_080

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

58

Unit IDs

6GZQ|1|A2|C|337
6GZQ|1|A2|U|338
6GZQ|1|A2|A|339
6GZQ|1|A2|C|340
6GZQ|1|A2|G|341
6GZQ|1|A2|G|342

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain J1

50S ribosomal protein L14

Chain O1

50S ribosomal protein L19