HL_6GZQ_105

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GGUAGGCAAAUCCGCC

Length

16 nucleotides

Bulged bases

6GZQ|1|A1|A|1538, 6GZQ|1|A1|C|1541, 6GZQ|1|A1|A|1542, 6GZQ|1|A1|A|1543, 6GZQ|1|A1|A|1544

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZQ|1|A1|G|1535
6GZQ|1|A1|G|1536
6GZQ|1|A1|U|1537
6GZQ|1|A1|A|1538
6GZQ|1|A1|G|1539
6GZQ|1|A1|G|1540
6GZQ|1|A1|C|1541
6GZQ|1|A1|A|1542
6GZQ|1|A1|A|1543
6GZQ|1|A1|A|1544
6GZQ|1|A1|U|1545
6GZQ|1|A1|C|1546
6GZQ|1|A1|C|1547
6GZQ|1|A1|G|1548
6GZQ|1|A1|C|1549
6GZQ|1|A1|C|1550

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain C1

50S ribosomal protein L2