HL_6GZQ_112

3D structure

PDB id

6GZQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

CCGUUAGUUGCCAGCGGUUCGGCCGGGCACUCUAACGG

Length

38 nucleotides

Bulged bases

6GZQ|1|A2|U|1107, 6GZQ|1|A2|U|1118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZQ|1|A2|C|1100
6GZQ|1|A2|C|1101
6GZQ|1|A2|G|1102
6GZQ|1|A2|U|1103
6GZQ|1|A2|U|1104
6GZQ|1|A2|A|1105
6GZQ|1|A2|G|1106
6GZQ|1|A2|U|1107
6GZQ|1|A2|U|1108
6GZQ|1|A2|G|1109
6GZQ|1|A2|C|1110
6GZQ|1|A2|C|1111
6GZQ|1|A2|A|1112
6GZQ|1|A2|G|1113
6GZQ|1|A2|C|1114
6GZQ|1|A2|G|1115
6GZQ|1|A2|G|1116
6GZQ|1|A2|U|1117
6GZQ|1|A2|U|1118
6GZQ|1|A2|C|1119
6GZQ|1|A2|G|1120
6GZQ|1|A2|G|1121
6GZQ|1|A2|C|1122
6GZQ|1|A2|C|1123
6GZQ|1|A2|G|1124
6GZQ|1|A2|G|1125
6GZQ|1|A2|G|1126
6GZQ|1|A2|C|1127
6GZQ|1|A2|A|1128
6GZQ|1|A2|C|1129
6GZQ|1|A2|U|1130
6GZQ|1|A2|C|1131
6GZQ|1|A2|U|1132
6GZQ|1|A2|A|1133
6GZQ|1|A2|A|1134
6GZQ|1|A2|C|1135
6GZQ|1|A2|G|1136
6GZQ|1|A2|G|1137

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain I2

30S ribosomal protein S9

Chain J2

30S ribosomal protein S10