HL_6I0Y_006

3D structure

PDB id

6I0Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

6I0Y|1|A|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I0Y_006 not in the Motif Atlas

Geometric match to HL_4WF9_006

Geometric discrepancy: 0.0724

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

6I0Y|1|A|G|194
6I0Y|1|A|A|195
6I0Y|1|A|A|196
6I0Y|1|A|A|197
6I0Y|1|A|C|198
6I0Y|1|A|A|199
6I0Y|1|A|U|200
6I0Y|1|A|C|201

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15

Chain X

50S ribosomal protein L28