Loop HL_6I0Y

3D structure

PDB id: 6I0Y (explore in PDB, NAKB, or RNA 3D Hub)
Description: TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å

Loop

Sequence: UUGAGCCUUGAUGGAAGUGUGGACGCCAGUCUGCAUGGCUUUAAUGUUUGA
Length: 51 nucleotides
Bulged bases: 6I0Y|1|A|U|2106, 6I0Y|1|A|C|2143, 6I0Y|1|A|A|2147, 6I0Y|1|A|U|2149, 6I0Y|1|A|C|2179
QA status: Missing nucleotides

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6I0Y|1|A|U|2098
6I0Y|1|A|U|2099
6I0Y|1|A|G|2100
6I0Y|1|A|A|2101
6I0Y|1|A|G|2102
6I0Y|1|A|C|2103
6I0Y|1|A|C|2104
6I0Y|1|A|U|2105
6I0Y|1|A|U|2106
6I0Y|1|A|G|2107
6I0Y|1|A|A|2108
6I0Y|1|A|U|2109
6I0Y|1|A|G|2110
6I0Y|1|A|G|2133
6I0Y|1|A|A|2134
6I0Y|1|A|A|2135
6I0Y|1|A|G|2136
6I0Y|1|A|U|2137
6I0Y|1|A|G|2138
6I0Y|1|A|U|2139
6I0Y|1|A|G|2140
6I0Y|1|A|G|2141
6I0Y|1|A|A|2142
6I0Y|1|A|C|2143
6I0Y|1|A|G|2144
6I0Y|1|A|C|2145
6I0Y|1|A|C|2146
6I0Y|1|A|A|2147
6I0Y|1|A|G|2148
6I0Y|1|A|U|2149
6I0Y|1|A|C|2150
6I0Y|1|A|U|2151
6I0Y|1|A|G|2152
6I0Y|1|A|C|2153
6I0Y|1|A|A|2154
6I0Y|1|A|U|2155
6I0Y|1|A|G|2156
6I0Y|1|A|G|2157
6I0Y|1|A|C|2179
6I0Y|1|A|U|2180
6I0Y|1|A|U|2181
6I0Y|1|A|U|2182
6I0Y|1|A|A|2183
6I0Y|1|A|A|2184
6I0Y|1|A|U|2185
6I0Y|1|A|G|2186
6I0Y|1|A|U|2187
6I0Y|1|A|U|2188
6I0Y|1|A|U|2189
6I0Y|1|A|G|2190
6I0Y|1|A|A|2191

Current chains

Chain A: 23S ribosomal RNA

Nearby chains

Chain H: 50S ribosomal protein L9

HL_6I0Y_051