HL_6I7V_020

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_020 not in the Motif Atlas

Homologous match to HL_4LFB_020

Geometric discrepancy: 0.1095

The information below is about HL_4LFB_020

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

6I7V|1|AA|C|897
6I7V|1|AA|G|898
6I7V|1|AA|C|899
6I7V|1|AA|A|900
6I7V|1|AA|A|901
6I7V|1|AA|G|902

Current chains

Chain AA

16S ribosmal RNA

Nearby chains

Chain DA

Large subunit ribosomal RNA; LSU rRNA

Chain DC

50S ribosomal protein L2