HL_6I7V_094

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGUUAAUCG

Length

9 nucleotides

Bulged bases

6I7V|1|CA|U|1325, 6I7V|1|CA|U|1329

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_094 not in the Motif Atlas

Geometric match to HL_3AL0_002

Geometric discrepancy: 0.3687

The information below is about HL_3AL0_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_15802.1

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

1

Unit IDs

6I7V|1|CA|C|1323
6I7V|1|CA|G|1324
6I7V|1|CA|U|1325
6I7V|1|CA|U|1326
6I7V|1|CA|A|1327
6I7V|1|CA|A|1328
6I7V|1|CA|U|1329
6I7V|1|CA|C|1330
6I7V|1|CA|G|1331

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CO

50S ribosomal protein L17

Chain CT

50S ribosomal protein L22