HL_6I7V_096

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

6I7V|1|CA|A|1392, 6I7V|1|CA|U|1396, 6I7V|1|CA|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_096 not in the Motif Atlas

Homologous match to HL_5J7L_168

Geometric discrepancy: 0.2643

The information below is about HL_5J7L_168

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6I7V|1|CA|G|1389
6I7V|1|CA|U|1390
6I7V|1|CA|U|1391
6I7V|1|CA|A|1392
6I7V|1|CA|A|1393
6I7V|1|CA|U|1394
6I7V|1|CA|A|1395
6I7V|1|CA|U|1396
6I7V|1|CA|U|1397
6I7V|1|CA|C|1398

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CU

50S ribosomal protein L23