HL_6I7V_101

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

6I7V|1|CA|A|1616, 6I7V|1|CA|A|1618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_101 not in the Motif Atlas

Homologous match to HL_7RQB_040

Geometric discrepancy: 0.1281

The information below is about HL_7RQB_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64430.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

6I7V|1|CA|C|1612
6I7V|1|CA|G|1613
6I7V|1|CA|A|1614
6I7V|1|CA|C|1615
6I7V|1|CA|A|1616
6I7V|1|CA|C|1617
6I7V|1|CA|A|1618
6I7V|1|CA|G|1619

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain C3

50S ribosomal protein L34

Chain CT

50S ribosomal protein L22