HL_6I7V_104

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

6I7V|1|CA|U|1729, 6I7V|1|CA|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_104 not in the Motif Atlas

Geometric match to HL_5M3H_001

Geometric discrepancy: 0.377

The information below is about HL_5M3H_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_49922.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

6I7V|1|CA|C|1727
6I7V|1|CA|C|1728
6I7V|1|CA|U|1729
6I7V|1|CA|C|1730
6I7V|1|CA|G|1731
6I7V|1|CA|C|1732
6I7V|1|CA|G|1733

Current chains

Chain CA

23S ribsomal RNA

Nearby chains