HL_6I7V_114

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

6I7V|1|CA|G|2250

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_114 not in the Motif Atlas

Homologous match to HL_5J7L_186

Geometric discrepancy: 0.1159

The information below is about HL_5J7L_186

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_85367.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

6I7V|1|CA|C|2248
6I7V|1|CA|U|2249
6I7V|1|CA|G|2250
6I7V|1|CA|G|2251
6I7V|1|CA|G|2252
6I7V|1|CA|G|2253
6I7V|1|CA|C|2254
6I7V|1|CA|G|2255
6I7V|1|CA|G|2256

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CN

50S ribosomal protein L16

Chain CX

50S ribosomal protein L27