HL_6I7V_128

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

6I7V|1|CA|U|2797, 6I7V|1|CA|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_128 not in the Motif Atlas

Homologous match to HL_5J7L_200

Geometric discrepancy: 0.4478

The information below is about HL_5J7L_200

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

6I7V|1|CA|C|2795
6I7V|1|CA|U|2796
6I7V|1|CA|U|2797
6I7V|1|CA|U|2798
6I7V|1|CA|A|2799
6I7V|1|CA|A|2800
6I7V|1|CA|G|2801

Current chains

Chain CA

23S ribsomal RNA

Nearby chains