HL_6I7V_136

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GUUUCGAC

Length

8 nucleotides

Bulged bases

6I7V|1|DA|U|138

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_136 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.2675

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

6I7V|1|DA|G|136
6I7V|1|DA|U|137
6I7V|1|DA|U|138
6I7V|1|DA|U|139
6I7V|1|DA|C|140
6I7V|1|DA|G|141
6I7V|1|DA|A|142
6I7V|1|DA|C|143

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DU

50S ribosomal protein L23