3D structure

PDB id
6I7V (explore in PDB, NAKB, or RNA 3D Hub)
Description
Ribosomal protein paralogs bL31 and bL36
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
GAAACAUC
Length
8 nucleotides
Bulged bases
6I7V|1|DA|A|196
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6I7V_138 not in the Motif Atlas
Geometric match to HL_5J7L_139
Geometric discrepancy: 0.0831
The information below is about HL_5J7L_139
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_30068.2
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
15

Unit IDs

6I7V|1|DA|G|194
6I7V|1|DA|A|195
6I7V|1|DA|A|196
6I7V|1|DA|A|197
6I7V|1|DA|C|198
6I7V|1|DA|A|199
6I7V|1|DA|U|200
6I7V|1|DA|C|201

Current chains

Chain DA
23S ribosomal RNA

Nearby chains

Chain DM
50S ribosomal protein L15
Chain DY
50S ribosomal protein L28

Coloring options:


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