HL_6I7V_200

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAAGACGAC

Length

9 nucleotides

Bulged bases

6I7V|1|DA|A|2820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_200 not in the Motif Atlas

Homologous match to HL_5J7L_201

Geometric discrepancy: 0.1047

The information below is about HL_5J7L_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

6I7V|1|DA|G|2819
6I7V|1|DA|A|2820
6I7V|1|DA|A|2821
6I7V|1|DA|G|2822
6I7V|1|DA|A|2823
6I7V|1|DA|C|2824
6I7V|1|DA|G|2825
6I7V|1|DA|A|2826
6I7V|1|DA|C|2827

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D1

50S ribosomal protein L32

Chain DD

50S ribosomal protein L3

Chain DO

50S ribosomal protein L17