HL_6I7V_223

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GCUGUGAGGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_223 not in the Motif Atlas

Geometric match to HL_8KAL_008

Geometric discrepancy: 0.3607

The information below is about HL_8KAL_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6I7V|1|CA|G|1220
6I7V|1|CA|C|1221
6I7V|1|CA|U|1222
6I7V|1|CA|G|1223
6I7V|1|CA|U|1224
6I7V|1|CA|G|1225
6I7V|1|CA|A|1226
6I7V|1|CA|G|1227
6I7V|1|CA|G|1228
6I7V|1|CA|C|1229

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CM

50S ribosomal protein L15

Chain CR

50S ribosomal protein L20

Chain CS

50S ribosomal protein L21