HL_6I7V_245

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GCUUAUGC

Length

8 nucleotides

Bulged bases

6I7V|1|DA|U|1174, 6I7V|1|DA|A|1175, 6I7V|1|DA|U|1176

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6I7V_245 not in the Motif Atlas

Homologous match to HL_5J7L_163

Geometric discrepancy: 0.3276

The information below is about HL_5J7L_163

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

6I7V|1|DA|G|1171
6I7V|1|DA|C|1172
6I7V|1|DA|U|1173
6I7V|1|DA|U|1174
6I7V|1|DA|A|1175
6I7V|1|DA|U|1176
6I7V|1|DA|G|1177
6I7V|1|DA|C|1178

Current chains

Chain DA

23S ribosomal RNA

Nearby chains