HL_6I9R_006
3D structure
- PDB id
- 6I9R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAGAGC
- Length
- 6 nucleotides
- Bulged bases
- 6I9R|1|A|G|1886
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6I9R_006 not in the Motif Atlas
- Geometric match to HL_4WF9_003
- Geometric discrepancy: 0.1523
- The information below is about HL_4WF9_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.9
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
6I9R|1|A|G|1884
6I9R|1|A|A|1885
6I9R|1|A|G|1886
6I9R|1|A|A|1887
6I9R|1|A|G|1888
6I9R|1|A|C|1889
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain g
- 39S ribosomal protein L49, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
Coloring options: