HL_6I9R_030
3D structure
- PDB id
- 6I9R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CUUCACCAG
- Length
- 9 nucleotides
- Bulged bases
- 6I9R|1|A|U|2864, 6I9R|1|A|C|2865
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6I9R_030 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.2994
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
6I9R|1|A|C|2862
6I9R|1|A|U|2863
6I9R|1|A|U|2864
6I9R|1|A|C|2865
6I9R|1|A|A|2866
6I9R|1|A|C|2867
6I9R|1|A|C|2868
6I9R|1|A|A|2869
6I9R|1|A|G|2870
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
Coloring options: