HL_6ICZ_006

3D structure

PDB id

6ICZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human post-catalytic spliceosome (P complex) at 3.0 angstrom

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUAUUGCAGUACCUC

Length

15 nucleotides

Bulged bases

6ICZ|1|H|C|164, 6ICZ|1|H|U|167

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ICZ|1|H|G|158
6ICZ|1|H|U|159
6ICZ|1|H|A|160
6ICZ|1|H|U|161
6ICZ|1|H|U|162
6ICZ|1|H|G|163
6ICZ|1|H|C|164
6ICZ|1|H|A|165
6ICZ|1|H|G|166
6ICZ|1|H|U|167
6ICZ|1|H|A|168
6ICZ|1|H|C|169
6ICZ|1|H|C|170
6ICZ|1|H|U|171
6ICZ|1|H|C|172

Current chains

Chain H

U2snRNA

Nearby chains

Chain X

PRKR-interacting protein 1

Chain n

Small nuclear ribonucleoprotein G

Chain o

U2 small nuclear ribonucleoprotein A'

Chain p

U2 small nuclear ribonucleoprotein B''