HL_6KE6_028

3D structure

PDB id

6KE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGAAACUUAAA

Length

11 nucleotides

Bulged bases

6KE6|1|SA|A|1133, 6KE6|1|SA|U|1135

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6KE6|1|SA|U|1129
6KE6|1|SA|G|1130
6KE6|1|SA|A|1131
6KE6|1|SA|A|1132
6KE6|1|SA|A|1133
6KE6|1|SA|C|1134
6KE6|1|SA|U|1135
6KE6|1|SA|U|1136
6KE6|1|SA|A|1137
6KE6|1|SA|A|1138
6KE6|1|SA|A|1139

Current chains

Chain SA

18S rRNA

Nearby chains

Chain B2

U3 small nucleolar RNA-associated protein 12

Chain RK

RNA 3'-terminal phosphate cyclase-like protein

Chain RV

Protein FAF1