HL_6KE6_030

3D structure

PDB id

6KE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUGCAUUGAUGC

Length

12 nucleotides

Bulged bases

6KE6|1|SA|A|1436

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6KE6|1|SA|G|1271
6KE6|1|SA|U|1272
6KE6|1|SA|G|1273
6KE6|1|SA|C|1274
6KE6|1|SA|A|1275
6KE6|1|SA|U|1276
6KE6|1|SA|U|1434
6KE6|1|SA|G|1435
6KE6|1|SA|A|1436
6KE6|1|SA|U|1437
6KE6|1|SA|G|1438
6KE6|1|SA|C|1439

Current chains

Chain SA

18S rRNA

Nearby chains

Chain RG

Ribosomal RNA small subunit methyltransferase NEP1

Chain RS

Essential nuclear protein 1