HL_6KWQ_001

3D structure

PDB id

6KWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of enterovirus 71 polymerase elongation complex (native form)

Experimental method

X-RAY DIFFRACTION

Resolution

1.76 Å

Loop

Sequence

UGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6KWQ_001 not in the Motif Atlas

Geometric match to HL_4K27_001

Geometric discrepancy: 0.1306

The information below is about HL_4K27_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

6KWQ|1|B|U|587
6KWQ|1|B|G|588
6KWQ|1|B|A|589
6KWQ|1|B|A|590
6KWQ|1|B|A|591
6KWQ|1|B|G|592

Current chains

Chain B

RNA (31-MER)

Nearby chains

Chain A

RNA-dependent RNA polymerase