HL_6LQM_012

3D structure

PDB id

6LQM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a pre-60S ribosomal subunit - state C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

UUUCCCGCGCGGGG

Length

14 nucleotides

Bulged bases

6LQM|1|2|U|514

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LQM|1|2|U|512
6LQM|1|2|U|513
6LQM|1|2|U|514
6LQM|1|2|C|515
6LQM|1|2|C|516
6LQM|1|2|C|517
6LQM|1|2|G|518
6LQM|1|2|C|519
6LQM|1|2|G|642
6LQM|1|2|C|643
6LQM|1|2|G|644
6LQM|1|2|G|645
6LQM|1|2|G|646
6LQM|1|2|G|647

Current chains

Chain 2

28S rRNA

Nearby chains

Chain L

60S ribosomal protein L27a

Chain Q

60S ribosomal protein L13