HL_6LQM_014

3D structure

PDB id

6LQM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a pre-60S ribosomal subunit - state C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

UCCCGGCGCGCCGG

Length

14 nucleotides

Bulged bases

6LQM|1|2|G|996, 6LQM|1|2|C|1047

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LQM|1|2|U|989
6LQM|1|2|C|990
6LQM|1|2|C|991
6LQM|1|2|C|992
6LQM|1|2|G|993
6LQM|1|2|G|994
6LQM|1|2|C|995
6LQM|1|2|G|996
6LQM|1|2|C|1047
6LQM|1|2|G|1048
6LQM|1|2|C|1049
6LQM|1|2|C|1050
6LQM|1|2|G|1051
6LQM|1|2|G|1064

Current chains

Chain 2

28S rRNA

Nearby chains

Chain v

60S ribosomal protein L6