HL_6LSS_014

3D structure

PDB id

6LSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a pre-60S ribosomal subunit - state preA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

UCCCGGCGCGCCGG

Length

14 nucleotides

Bulged bases

6LSS|1|2|G|996, 6LSS|1|2|C|1047, 6LSS|1|2|G|1048

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LSS|1|2|U|989
6LSS|1|2|C|990
6LSS|1|2|C|991
6LSS|1|2|C|992
6LSS|1|2|G|993
6LSS|1|2|G|994
6LSS|1|2|C|995
6LSS|1|2|G|996
6LSS|1|2|C|1047
6LSS|1|2|G|1048
6LSS|1|2|C|1049
6LSS|1|2|C|1050
6LSS|1|2|G|1051
6LSS|1|2|G|1064

Current chains

Chain 2

28S rRNA

Nearby chains

Chain o

60S ribosomal protein L6