HL_6LSS_020

3D structure

PDB id

6LSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a pre-60S ribosomal subunit - state preA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GGCGCGCUCGCC

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LSS|1|2|G|1403
6LSS|1|2|G|1404
6LSS|1|2|C|1405
6LSS|1|2|G|1406
6LSS|1|2|C|1407
6LSS|1|2|G|1408
6LSS|1|2|C|1409
6LSS|1|2|U|1410
6LSS|1|2|C|1411
6LSS|1|2|G|1412
6LSS|1|2|C|1413
6LSS|1|2|C|1414

Current chains

Chain 2

28S rRNA

Nearby chains

Chain C

60S ribosomal protein L29