HL_6LSS_077
3D structure
- PDB id
- 6LSS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a pre-60S ribosomal subunit - state preA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- GUGAAUUGCAGGACACAUUGAUC
- Length
- 23 nucleotides
- Bulged bases
- 6LSS|1|8|A|82, 6LSS|1|8|U|85
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6LSS|1|8|G|68
6LSS|1|8|U|69
6LSS|1|8|G|70
6LSS|1|8|A|71
6LSS|1|8|A|72
6LSS|1|8|U|73
6LSS|1|8|U|74
6LSS|1|8|G|75
6LSS|1|8|C|76
6LSS|1|8|A|77
6LSS|1|8|G|78
6LSS|1|8|G|79
6LSS|1|8|A|80
6LSS|1|8|C|81
6LSS|1|8|A|82
6LSS|1|8|C|83
6LSS|1|8|A|84
6LSS|1|8|U|85
6LSS|1|8|U|86
6LSS|1|8|G|87
6LSS|1|8|A|88
6LSS|1|8|U|89
6LSS|1|8|C|90
Current chains
- Chain 8
- 28S rRNA
Nearby chains
- Chain 2
- Large subunit ribosomal RNA; LSU rRNA
- Chain 4
- Nucleolar GTP-binding protein 1
- Chain H
- 60S ribosomal protein L35
- Chain M
- 60S ribosomal protein L37
- Chain P
- 60S ribosomal protein L39
- Chain h
- 60S ribosomal protein L26
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