HL_6LTP_002

3D structure

PDB id

6LTP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Cas12i2 binary complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UUUCA

Length

5 nucleotides

Bulged bases

6LTP|1|H|U|13, 6LTP|1|H|U|14

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6LTP_002 not in the Motif Atlas

Geometric match to HL_6LTU_001

Geometric discrepancy: 0.0938

The information below is about HL_6LTU_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.4

Basepair signature

cWW-F

Number of instances in this motif group

48

Unit IDs

6LTP|1|H|U|12
6LTP|1|H|U|13
6LTP|1|H|U|14
6LTP|1|H|C|15
6LTP|1|H|A|16

Current chains

Chain H

crRNA (56-mer RNA)

Nearby chains

Chain G

Cas12i2