HL_6LU8_043

3D structure

PDB id

6LU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-60S ribosomal subunit - state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

CGGUUCCGG

Length

9 nucleotides

Bulged bases

6LU8|1|2|U|2707, 6LU8|1|2|C|2709, 6LU8|1|2|G|2711

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LU8|1|2|C|2704
6LU8|1|2|G|2705
6LU8|1|2|G|2706
6LU8|1|2|U|2707
6LU8|1|2|U|2708
6LU8|1|2|C|2709
6LU8|1|2|C|2710
6LU8|1|2|G|2711
6LU8|1|2|G|2712

Current chains

Chain 2

28S rRNA

Nearby chains

Chain a

60S ribosomal protein L19

Chain d

60S ribosomal protein L22

Chain g

60S ribosomal protein L23a