HL_6MEC_010

3D structure

PDB id

6MEC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a group II intron retroelement after DNA integration

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCUCGCUCGUC

Length

11 nucleotides

Bulged bases

6MEC|1|A|C|325, 6MEC|1|A|U|326

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MEC|1|A|G|324
6MEC|1|A|C|325
6MEC|1|A|U|326
6MEC|1|A|C|327
6MEC|1|A|G|328
6MEC|1|A|C|329
6MEC|1|A|U|330
6MEC|1|A|C|331
6MEC|1|A|G|332
6MEC|1|A|U|333
6MEC|1|A|C|334

Current chains

Chain A

T.el4h RNA

Nearby chains

Chain B

Sense Target DNA

Chain C

Maturase reverse transcriptase