HL_6MEC_014

3D structure

PDB id

6MEC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a group II intron retroelement after DNA integration

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUGAGGAGACAAUCCAACAUCA

Length

22 nucleotides

Bulged bases

6MEC|1|A|U|545

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MEC|1|A|U|526
6MEC|1|A|U|527
6MEC|1|A|G|528
6MEC|1|A|A|529
6MEC|1|A|G|530
6MEC|1|A|G|531
6MEC|1|A|A|532
6MEC|1|A|G|533
6MEC|1|A|A|534
6MEC|1|A|C|535
6MEC|1|A|A|536
6MEC|1|A|A|537
6MEC|1|A|U|538
6MEC|1|A|C|539
6MEC|1|A|C|540
6MEC|1|A|A|541
6MEC|1|A|A|542
6MEC|1|A|C|543
6MEC|1|A|A|544
6MEC|1|A|U|545
6MEC|1|A|C|546
6MEC|1|A|A|547

Current chains

Chain A

T.el4h RNA

Nearby chains