HL_6MJ0_009
3D structure
- PDB id
- 6MJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the complete turnip yellow mosaic virus 3'UTR
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GUGCAACUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_43993.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
6MJ0|1|B|G|66
6MJ0|1|B|U|67
6MJ0|1|B|G|68
6MJ0|1|B|C|69
6MJ0|1|B|A|70
6MJ0|1|B|A|71
6MJ0|1|B|C|72
6MJ0|1|B|U|73
6MJ0|1|B|C|74
Current chains
- Chain B
- RNA (101-MER)
Nearby chains
No other chains within 10ÅColoring options: