HL_6MSF_001
3D structure
- PDB id
- 6MSF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- F6 APTAMER MS2 COAT PROTEIN COMPLEX
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GUCAC
- Length
- 5 nucleotides
- Bulged bases
- 6MSF|1|R|U|7||||P_1, 6MSF|1|R|A|9||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38927.6
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 34
Unit IDs
6MSF|1|R|G|6||||P_1
6MSF|1|R|U|7||||P_1
6MSF|1|R|C|8||||P_1
6MSF|1|R|A|9||||P_1
6MSF|1|R|C|10||||P_1
Current chains
- Chain R
- RNA (5'-R(*CP*CP*AP*CP*AP*GP*UP*CP*AP*CP*UP*GP*GP*G)-3')
Nearby chains
- Chain A
- PROTEIN (MS2 PROTEIN CAPSID)
- Chain C
- PROTEIN (MS2 PROTEIN CAPSID)
Coloring options: