HL_6MTB_061
3D structure
- PDB id
- 6MTB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGGAACG(P7G)GC
- Length
- 10 nucleotides
- Bulged bases
- 6MTB|1|5|A|3876, 6MTB|1|5|A|3877, 6MTB|1|5|C|3878, 6MTB|1|5|G|3881
- QA status
- Modified nucleotides: P7G
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6MTB_061 not in the Motif Atlas
- Homologous match to HL_8P9A_162
- Geometric discrepancy: 0.1058
- The information below is about HL_8P9A_162
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
6MTB|1|5|G|3873
6MTB|1|5|G|3874
6MTB|1|5|G|3875
6MTB|1|5|A|3876
6MTB|1|5|A|3877
6MTB|1|5|C|3878
6MTB|1|5|G|3879
6MTB|1|5|P7G|3880
6MTB|1|5|G|3881
6MTB|1|5|C|3882
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain e
- 60S ribosomal protein L32
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