HL_6MTB_099
3D structure
- PDB id
- 6MTB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- ACUUUAAAUCCUU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6MTB_099 not in the Motif Atlas
- Homologous match to HL_4V88_199
- Geometric discrepancy: 0.148
- The information below is about HL_4V88_199
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_05304.1
- Basepair signature
- cWW-cWW-F-F-tSH-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6MTB|1|9|A|569
6MTB|1|9|C|570
6MTB|1|9|U|571
6MTB|1|9|U|572
6MTB|1|9|U|573
6MTB|1|9|A|574
6MTB|1|9|A|575
6MTB|1|9|A|576
6MTB|1|9|U|577
6MTB|1|9|C|578
6MTB|1|9|C|579
6MTB|1|9|U|580
6MTB|1|9|U|581
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain EE
- 40S ribosomal protein S4, X isoform
- Chain JJ
- 40S ribosomal protein S9
- Chain YY
- 40S ribosomal protein S24
Coloring options: