HL_6MTC_016

3D structure

PDB id

6MTC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCGAGACCCGU

Length

11 nucleotides

Bulged bases

6MTC|1|5|C|967

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTC|1|5|G|961
6MTC|1|5|C|962
6MTC|1|5|G|963
6MTC|1|5|A|964
6MTC|1|5|G|965
6MTC|1|5|A|966
6MTC|1|5|C|967
6MTC|1|5|C|968
6MTC|1|5|C|969
6MTC|1|5|G|970
6MTC|1|5|U|971

Current chains

Chain 5

28S rRNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain E

60S ribosomal protein L6

Chain F

60S ribosomal protein L7