HL_6MTC_066
3D structure
- PDB id
- 6MTC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUU(E6G)GGUUUUA
- Length
- 11 nucleotides
- Bulged bases
- 6MTC|1|5|U|4354
- QA status
- Modified nucleotides: E6G
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6MTC_066 not in the Motif Atlas
- Geometric match to HL_8H1B_001
- Geometric discrepancy: 0.2677
- The information below is about HL_8H1B_001
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_10453.3
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
6MTC|1|5|U|4352
6MTC|1|5|U|4353
6MTC|1|5|U|4354
6MTC|1|5|E6G|4355
6MTC|1|5|G|4356
6MTC|1|5|G|4357
6MTC|1|5|U|4358
6MTC|1|5|U|4359
6MTC|1|5|U|4360
6MTC|1|5|U|4361
6MTC|1|5|A|4362
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain L
- 60S ribosomal protein L13
- Chain a
- 60S ribosomal protein L27a
- Chain i
- 60S ribosomal protein L36
- Chain o
- 60S ribosomal protein L36a
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