HL_6MTD_055

3D structure

PDB id

6MTD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGAGGCCGCCGGUGAAAUACC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTD|1|5|G|3970
6MTD|1|5|G|3971
6MTD|1|5|A|3972
6MTD|1|5|G|3973
6MTD|1|5|G|3974
6MTD|1|5|C|3975
6MTD|1|5|C|3976
6MTD|1|5|G|4039
6MTD|1|5|C|4040
6MTD|1|5|C|4041
6MTD|1|5|G|4042
6MTD|1|5|G|4043
6MTD|1|5|U|4044
6MTD|1|5|G|4045
6MTD|1|5|A|4046
6MTD|1|5|A|4047
6MTD|1|5|A|4048
6MTD|1|5|U|4049
6MTD|1|5|A|4050
6MTD|1|5|C|4051
6MTD|1|5|C|4052

Current chains

Chain 5

28S rRNA

Nearby chains

Chain u

uL1