HL_6N8K_051
3D structure
- PDB id
- 6N8K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AGGGAACGGGCU
- Length
- 12 nucleotides
- Bulged bases
- 6N8K|1|1|A|2372, 6N8K|1|1|A|2373, 6N8K|1|1|C|2374
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6N8K|1|1|A|2368
6N8K|1|1|G|2369
6N8K|1|1|G|2370
6N8K|1|1|G|2371
6N8K|1|1|A|2372
6N8K|1|1|A|2373
6N8K|1|1|C|2374
6N8K|1|1|G|2375
6N8K|1|1|G|2376
6N8K|1|1|G|2377
6N8K|1|1|C|2378
6N8K|1|1|U|2379
Current chains
- Chain 1
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain O
- 60S ribosomal protein L16-A
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L33-A
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