HL_6N8K_085
3D structure
- PDB id
- 6N8K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUUAGUACGAGAGGAACAG
- Length
- 19 nucleotides
- Bulged bases
- 6N8K|1|1|A|3027
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6N8K|1|1|C|3018
6N8K|1|1|U|3019
6N8K|1|1|U|3020
6N8K|1|1|A|3021
6N8K|1|1|G|3022
6N8K|1|1|U|3023
6N8K|1|1|A|3024
6N8K|1|1|C|3025
6N8K|1|1|G|3026
6N8K|1|1|A|3027
6N8K|1|1|G|3028
6N8K|1|1|A|3029
6N8K|1|1|G|3030
6N8K|1|1|G|3031
6N8K|1|1|A|3032
6N8K|1|1|A|3033
6N8K|1|1|C|3034
6N8K|1|1|A|3035
6N8K|1|1|G|3036
Current chains
- Chain 1
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain H
- 60S ribosomal protein L9-A
- Chain V
- 60S ribosomal protein L23-A
- Chain b
- Nucleolar GTP-binding protein 1
- Chain y
- Eukaryotic translation initiation factor 6
- Chain z
- UPF0642 protein YBL028C
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