HL_6N8K_087

3D structure

PDB id

6N8K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCCUUGUUGU

Length

10 nucleotides

Bulged bases

6N8K|1|1|U|3351, 6N8K|1|1|U|3354, 6N8K|1|1|U|3355

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N8K|1|1|G|3348
6N8K|1|1|C|3349
6N8K|1|1|C|3350
6N8K|1|1|U|3351
6N8K|1|1|U|3352
6N8K|1|1|G|3353
6N8K|1|1|U|3354
6N8K|1|1|U|3355
6N8K|1|1|G|3356
6N8K|1|1|U|3357

Current chains

Chain 1

Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA

Nearby chains