HL_6N8K_092
3D structure
- PDB id
- 6N8K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGAUCA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6N8K_092 not in the Motif Atlas
- Homologous match to HL_8CRE_065
- Geometric discrepancy: 0.2504
- The information below is about HL_8CRE_065
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_65794.5
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
6N8K|1|1|U|3068
6N8K|1|1|G|3069
6N8K|1|1|A|3070
6N8K|1|1|U|3071
6N8K|1|1|C|3072
6N8K|1|1|A|3073
Current chains
- Chain 1
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Nearby chains
- Chain R
- 60S ribosomal protein L19-A
- Chain U
- 60S ribosomal protein L22-A
- Chain b
- Nucleolar GTP-binding protein 1
- Chain d
- 60S ribosomal protein L31-A
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